I haven't thought to put it all down but things I miss(ed) are.
The windows clipper (used to be able to right click on the Evernote icon and clip anything from the screen into Evernote with no issues)
The auto folder import (this is back - but was missing for over a year)
The clean layout (now when I open the app on my windows PC I am presented with so much b/s I can't think! What the f is scratch pad? Why are more than 50% of each note thumbnail just empty space , and the thumb of the note part is so small proportionally.
Why can't I resize the panels? Like when I am in votes view, the new note space is 50% and the list of thumbs on the left is 50%, but why cant I drag the bar to see more thumbs? I can drag it to make the note thumb area smaller, but not larger.
I have an MS Surface PC with a Pen, a Samsung Note with a Pen, and an iPad with a pen, yet I can't hand write in the note compose window with any of them! Why? Evernote does an awesome job of reading handwritten notes (so I can search them), but it wont let me write them!
Thumbs are broken, when I scroll down a few pages in my notes view - all the thumbnails, instead of showing my notes, are just white boxes with Grey paper Icon in them. The notes themselves are fine, but I have no previews.
FYI I have 8,365 notes dating back to April 2010.