There are posts about this issue going back 3 years. I have 6 years of scanned files in dozens of folders I need to export as a backup. Using an exported HTML file with links to the PDFS makes sense but the links don't do anything. Parsing all these files each time I need to find a file is not a solution as the file names (created by ScanSnap) are nonsense names and Evernote has the metadata with the "real name".
Is Evernote going to fix this (ever) ?